Index

_

__exchange_multi_walker() (odatse.algorithm.exchange.Algorithm method) __exchange_single_walker() (odatse.algorithm.exchange.Algorithm method) __init__() (odatse._info.Info method) (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.min_search.Algorithm method) (odatse.algorithm.montecarlo.AlgorithmBase method) (odatse.algorithm.pamc.Algorithm method) (odatse.domain._domain.DomainBase method) (odatse.domain.meshgrid.MeshGrid method) (odatse.domain.region.Region method) (odatse.solver._solver.SolverBase method) (odatse.solver.analytical.Solver method) (odatse.solver.function.Solver method) (odatse.util.limitation.Inequality method) (odatse.util.limitation.LimitationBase method) (odatse.util.limitation.Unlimited method) (odatse.util.logger.Logger method) (odatse.util.mapping.Affine method) (odatse.util.neighborlist.Cells method) (odatse.util.resampling.BinarySearch method) (odatse.util.resampling.WalkerTable method) __init_rng() (odatse.algorithm._algorithm.AlgorithmBase method) _asdict() (odatse.util.separateT.Entry method) _check_parameters() (odatse.algorithm._algorithm.AlgorithmBase method) _cleanup() (odatse._info.Info method) _evaluate() (odatse.algorithm.montecarlo.AlgorithmBase method) _exchange() (odatse.algorithm.exchange.Algorithm method) _find_scheduling() (odatse.algorithm.pamc.Algorithm method) _gather_information() (odatse.algorithm.pamc.Algorithm method) _init_random() (odatse.domain.region.Region method) _initialize() (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.montecarlo.AlgorithmBase method) (odatse.algorithm.pamc.Algorithm method) _load_data() (odatse.algorithm._algorithm.AlgorithmBase method) _load_state() (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.pamc.Algorithm method)

_make() (odatse.util.separateT.Entry class method) _output_results() (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.min_search.Algorithm method) _post() (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.min_search.Algorithm method) (odatse.algorithm.pamc.Algorithm method) _prepare() (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.min_search.Algorithm method) (odatse.algorithm.pamc.Algorithm method) _print_info() (odatse.algorithm.exchange.Algorithm method) _replace() (odatse.util.separateT.Entry method) _resample() (odatse.algorithm.pamc.Algorithm method) _resample_fixed() (odatse.algorithm.pamc.Algorithm method) _resample_varied() (odatse.algorithm.pamc.Algorithm method) _run() (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.min_search.Algorithm method) (odatse.algorithm.pamc.Algorithm method) _sample() (odatse.util.resampling.BinarySearch method) (odatse.util.resampling.WalkerTable method) _save_data() (odatse.algorithm._algorithm.AlgorithmBase method) _save_state() (odatse.algorithm.bayes.Algorithm method) (odatse.algorithm.exchange.Algorithm method) (odatse.algorithm.mapper_mpi.Algorithm method) (odatse.algorithm.pamc.Algorithm method) _save_stats() (odatse.algorithm.pamc.Algorithm method) _setup() (odatse.domain.meshgrid.MeshGrid method) (odatse.domain.region.Region method) _setup_from_file() (odatse.domain.meshgrid.MeshGrid method) _setup_grid() (odatse.domain.meshgrid.MeshGrid method) _setup_neighbour() (odatse.algorithm.montecarlo.AlgorithmBase method) _show_parameters() (odatse.algorithm._algorithm.AlgorithmBase method) _write_result() (odatse.algorithm.montecarlo.AlgorithmBase method) _write_result_header() (odatse.algorithm.montecarlo.AlgorithmBase method)

A

ackley() (in module odatse.solver.analytical) Affine (class in odatse.util.mapping) Algorithm (class in odatse.algorithm.bayes) (class in odatse.algorithm.exchange) (class in odatse.algorithm.mapper_mpi) (class in odatse.algorithm.min_search) (class in odatse.algorithm.pamc)

AlgorithmBase (class in odatse.algorithm._algorithm) (class in odatse.algorithm.montecarlo) AlgorithmStatus (class in odatse.algorithm._algorithm)

B

bayes_max_num_probes (odatse.algorithm.bayes.Algorithm attribute) best_action (odatse.algorithm.bayes.Algorithm attribute) best_fx (odatse.algorithm.bayes.Algorithm attribute) (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute) best_istep (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute)

best_iwalker (odatse.algorithm.montecarlo.AlgorithmBase attribute) best_x (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute) betas (odatse.algorithm.pamc.Algorithm attribute) BinarySearch (class in odatse.util.resampling)

C

cellcoord2cellindex() (odatse.util.neighborlist.Cells method) cellindex2cellcoord() (odatse.util.neighborlist.Cells method) Cells (class in odatse.util.neighborlist) choose_algorithm() (in module odatse.algorithm)

comm (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute) coord2cellcoord() (odatse.util.neighborlist.Cells method) coord2cellindex() (odatse.util.neighborlist.Cells method) count() (odatse.util.logger.Logger method)

D

do_split() (odatse.domain.meshgrid.MeshGrid method)

DomainBase (class in odatse.domain._domain)

E

Entry (class in odatse.util.separateT) Error

evaluate() (odatse.solver._solver.SolverBase method) (odatse.solver.function.Solver method) exchange_direction (odatse.algorithm.exchange.Algorithm attribute)

F

flatten_dict() (in module odatse.algorithm._algorithm) from_dict() (odatse._info.Info method) (odatse.domain.meshgrid.MeshGrid class method) (odatse.util.limitation.Inequality class method) (odatse.util.mapping.Affine class method) from_file() (odatse._info.Info class method) (odatse.domain.meshgrid.MeshGrid class method)

fx (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute) (odatse.util.separateT.Entry attribute) fx_list (odatse.algorithm.bayes.Algorithm attribute)

G

get_results() (odatse.solver.function.Solver method)

H

himmelblau() (in module odatse.solver.analytical)

I

Inequality (class in odatse.util.limitation) Info (class in odatse._info) initial_list (odatse.domain.region.Region attribute) initialize() (in module odatse._initialize) (odatse.domain.region.Region method) inode (odatse.algorithm.exchange.Algorithm attribute) InputError

interval (odatse.algorithm.bayes.Algorithm attribute) is_active() (odatse.util.logger.Logger method) is_bidirectional() (in module odatse.util.graph) is_connected() (in module odatse.util.graph) istep (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute)

J

judge() (odatse.util.limitation.Inequality method) (odatse.util.limitation.LimitationBase method) (odatse.util.limitation.Unlimited method)

L

label_list (odatse.algorithm.bayes.Algorithm attribute) LimitationBase (class in odatse.util.limitation) linear_regression_test() (in module odatse.solver.analytical) load() (in module odatse.util.toml)

load_neighbor_list() (in module odatse.util.neighborlist) local_update() (odatse.algorithm.montecarlo.AlgorithmBase method) Logger (class in odatse.util.logger) logweights (odatse.algorithm.pamc.Algorithm attribute)

M

main() (in module odatse._main) (odatse.algorithm._algorithm.AlgorithmBase method) make_neighbor_list() (in module odatse.util.neighborlist) make_neighbor_list_cell() (in module odatse.util.neighborlist) make_neighbor_list_naive() (in module odatse.util.neighborlist) MappingBase (class in odatse.util.mapping) max_list (odatse.domain.region.Region attribute) mesh_list (odatse.algorithm.bayes.Algorithm attribute) MeshGrid (class in odatse.domain.meshgrid) min_list (odatse.domain.region.Region attribute) module odatse odatse._info odatse._initialize odatse._main odatse._runner odatse.algorithm odatse.algorithm._algorithm odatse.algorithm.bayes odatse.algorithm.exchange odatse.algorithm.mapper_mpi odatse.algorithm.min_search odatse.algorithm.montecarlo odatse.algorithm.pamc odatse.domain odatse.domain._domain odatse.domain.meshgrid odatse.domain.region odatse.exception odatse.mpi odatse.solver odatse.solver._solver odatse.solver.analytical odatse.solver.function odatse.util odatse.util.graph odatse.util.limitation odatse.util.logger odatse.util.mapping odatse.util.neighborlist odatse.util.read_matrix odatse.util.resampling odatse.util.separateT odatse.util.toml

mpirank (odatse.domain._domain.DomainBase attribute) mpisize (odatse.domain._domain.DomainBase attribute)

N

name (odatse.solver._solver.SolverBase property) neighborcells() (odatse.util.neighborlist.Cells method) nreplica (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.pamc.Algorithm attribute)

num_rand_basis (odatse.algorithm.bayes.Algorithm attribute) nwalkers (odatse.algorithm.montecarlo.AlgorithmBase attribute)

O

odatse module odatse._info module odatse._initialize module odatse._main module odatse._runner module odatse.algorithm module odatse.algorithm._algorithm module odatse.algorithm.bayes module odatse.algorithm.exchange module odatse.algorithm.mapper_mpi module odatse.algorithm.min_search module odatse.algorithm.montecarlo module odatse.algorithm.pamc module odatse.domain module odatse.domain._domain module odatse.domain.meshgrid module odatse.domain.region module

odatse.exception module odatse.mpi module odatse.solver module odatse.solver._solver module odatse.solver.analytical module odatse.solver.function module odatse.util module odatse.util.graph module odatse.util.limitation module odatse.util.logger module odatse.util.mapping module odatse.util.neighborlist module odatse.util.read_matrix module odatse.util.resampling module odatse.util.separateT module odatse.util.toml module out_of_bound() (odatse.util.neighborlist.Cells method) output_dir (odatse.domain._domain.DomainBase attribute)

P

param_list (odatse.algorithm.bayes.Algorithm attribute) post() (odatse.algorithm._algorithm.AlgorithmBase method) prepare() (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.solver.function.Solver method) (odatse.util.logger.Logger method)

propose() (odatse.algorithm.montecarlo.AlgorithmBase method)

Q

quadratics() (in module odatse.solver.analytical)

quartics() (in module odatse.solver.analytical)

R

random_max_num_probes (odatse.algorithm.bayes.Algorithm attribute) rank (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute) read_matrix() (in module odatse.util.read_matrix) read_Ts() (in module odatse.algorithm.montecarlo) read_vector() (in module odatse.util.read_matrix) Region (class in odatse.domain.region)

rep2T (odatse.algorithm.exchange.Algorithm attribute) Resampler (class in odatse.util.resampling) reset() (odatse.util.resampling.BinarySearch method) (odatse.util.resampling.WalkerTable method) root_dir (odatse.domain._domain.DomainBase attribute) rosenbrock() (in module odatse.solver.analytical) run() (odatse.algorithm._algorithm.AlgorithmBase method) (odatse.solver.function.Solver method)

S

sample() (odatse.util.resampling.BinarySearch method) (odatse.util.resampling.WalkerTable method) score (odatse.algorithm.bayes.Algorithm attribute) separateT() (in module odatse.util.separateT) set_function() (odatse.solver.function.Solver method)

set_runner() (odatse.algorithm._algorithm.AlgorithmBase method) Solver (class in odatse.solver.analytical) (class in odatse.solver.function) SolverBase (class in odatse.solver._solver) step (odatse.util.separateT.Entry attribute) store_file() (odatse.domain.meshgrid.MeshGrid method)

T

T2rep (odatse.algorithm.exchange.Algorithm attribute) Tindex (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute)

TrivialMapping (class in odatse.util.mapping) Ts (odatse.algorithm.montecarlo.AlgorithmBase attribute)

U

unit_list (odatse.domain.region.Region attribute)

Unlimited (class in odatse.util.limitation)

W

walker (odatse.util.separateT.Entry attribute) WalkerTable (class in odatse.util.resampling)

write() (odatse.util.logger.Logger method) write_neighbor_list() (in module odatse.util.neighborlist) write_timer() (odatse.algorithm._algorithm.AlgorithmBase method)

X

x (odatse.algorithm.exchange.Algorithm attribute) (odatse.algorithm.montecarlo.AlgorithmBase attribute) (odatse.algorithm.pamc.Algorithm attribute)

xopt (odatse.algorithm.bayes.Algorithm attribute) xs (odatse.util.separateT.Entry attribute)